Sitemap
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
About me
About me
About me
About me
Posts
入鹿TOKYO 六本木
Published:
2時間くらい並びました。 食べログ
函館塩 ラーメン 五稜郭
Published:
麩が乗っているのが特徴的です。 食べログ
らーめん MAIKAGURA
Published:
百名店2023が発表されました。鶏白湯ラーメン初めて食べたかもしれません。 食べログ
中華そば 和渦 TOKYO
Published:
サイドメニューの丼系が50円なのが嬉しいです。 食べログ
町田汁場 しおらーめん進化 本店
Published:
一番印象に残っているチャーシューかもしれません。とてもおいしかったです。 食べログ
麺処 ほん田 秋葉原本店
Published:
また百名店を巡り始めるのでした。 食べログ
ほっこり中華そば うお青
Published:
高尾山リベンジの前に寄りました。見事に登頂しました。またしばらく百名店巡りはペンディングするのでした… 食べログ
ほっこり中華そば もつけ
Published:
高尾山に登る前に寄ったのですが、雨が降ってきて登山は断念しました。 食べログ
四川担担麺 阿吽 湯島本店
Published:
一年ぶりくらいに新規の百名店開拓。辛さ2,しびれ1が最適解です。 食べログ
鯛塩そば 灯花 本店
Published:
上品な味わいでした。 食べログ
竹末東京Premium
Published:
目の前で肉の部位を説明しながらチャーシューをスライスしてくれるシステム。 食べログ
麺屋ひょっとこ 交通会館店
Published:
店内の面積が過去一狭い。柚子が香るさっぱり系です。 食べログ
手打式超多加水麺 ののくら
Published:
2020年時点で最も食べログの評価が高いお店でした(4.13)。平日の昼に雨の中2時間並んで食べたのを覚えています。閉店してしまったのが残念。。。 食べログ
ラーメン屋 トイ・ボックス
Published:
The 醤油って感じでした。 食べログ
RAMEN にじゅうぶんのいち
Published:
炊き込みご飯も食べました。 食べログ
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
projects
[Research] n2v_rc: Node2Vec Recursive Clustering
We constructed a gene co-expression network and developed an algorithm to extract biologically diverse gene groups with graph embedding using node2vec.
[Research] NRBdMF: Neighborhood Regularized Bidirectional Matrix Factorization
We developed a matrix factorization recommendation algorithm that considers the bidirectional nature of drug effects (side effects - indications) and can provide highly interpretable prediction results.
[Research] LiverDeconv: Liver-Specific Deconvolution Model
We developed a deconvolution method that can accurately predict the proportions of immune cells from bulk RNA-Seq of liver tissues by modeling the cell types specific to the liver tissue.
[Intern] Summer Internship at Preferred Networks, Inc.
「遺伝⼦に関するグラフを利⽤したモデルの開発 」に取り組みました。
[Personal] PAM_Cython: Pachinko Allocation Model (PAM) with Cython
PAMをCythonで実装して高速化しました。
[Research] GLDADec: Guided LDA Deconvolution
We proposed a Guided LDA Deconvolution method, called GLDADec, to estimate cell type proportions by using marker gene names as partial prior information.
publications
Extraction of diverse gene groups with individual relationship from gene co-expression networks
Published in arXiv, 2021
Recommended citation: Azuma, Iori, Tadahaya Mizuno, and Hiroyuki Kusuhara. "Extraction of diverse gene groups with individual relationship from gene co-expression networks." arXiv preprint arXiv:2112.01180 (2021).
Download Paper
NRBdMF: A Recommendation Algorithm for Predicting Drug Effects Considering Directionality
Published in Journal of Chemical Information and Modeling, 2023
Recommended citation: Azuma, Iori, Tadahaya Mizuno, and Hiroyuki Kusuhara. "NRBdMF: A recommendation algorithm for predicting drug effects considering directionality." Journal of Chemical Information and Modeling 63.2 (2023): 474-483.
Download Paper
Rat Deconvolution as Knowledge Miner for Immune Cell Trafficking from Toxicogenomics Databases
Published in Toxicological Sciences, 2023
Recommended citation: Morita, Katsuhisa, et al. "Rat deconvolution as knowledge miner for immune cell trafficking from toxicogenomics databases." Toxicological Sciences (2023): 2023-06.
Download Paper
Investigation of the usefulness of liver-specific deconvolution method by establishing a liver benchmark dataset
Published in NAR Genomics and Bioinformatics, 2024
Recommended citation: Azuma, Iori, et al. "Investigation of the usefulness of liver-specific deconvolution method by establishing a liver benchmark dataset." NAR Genomics and Bioinformatics (2024): 2024-03.
Download Paper
GLDADec: marker-gene guided LDA modelling for bulk gene expression deconvolution
Published in Briefings in Bioinformatics, 2024
Recommended citation: Azuma, Iori, et al. "GLDADec: marker-gene guided LDA modelling for bulk gene expression deconvolution." Briefings in Bioinformatics (2024): 2024-07
Download Paper
talks
Talk 1 on Relevant Topic in Your Field
Published:
This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.